Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | KR76_RS08080 | Not Available | Negative | 1655485 - 1656762 | 42872.2 |
| marr family winged helix-turn-helix transcriptional regulator | KR76_RS08085 | Not Available | Negative | 1656759 - 1657193 | 15289.4 |
| duf1697 domain-containing protein | KR76_RS08090 | Not Available | Positive | 1657260 - 1657802 | 19360.0 |
| atp-dependent clp protease adapter clps | KR76_RS08095 | Not Available | Positive | 1657834 - 1658142 | 11506.6 |
| duf2017 domain-containing protein | KR76_RS08100 | Not Available | Positive | 1658156 - 1658740 | 21853.4 |
| universal stress protein | KR76_RS08105 | Not Available | Negative | 1658755 - 1659150 | 13845.7 |
| tripartite tricarboxylate transporter permease | KR76_RS08110 | Not Available | Negative | 1659147 - 1660673 | 52705.4 |
| tripartite tricarboxylate transporter tctb family protein | KR76_RS08115 | Not Available | Negative | 1660673 - 1661203 | 18321.2 |
| bug family tripartite tricarboxylate transporter substrate binding protein | KR76_RS08120 | Not Available | Negative | 1661200 - 1662174 | 34663.4 |
| atp-binding protein | KR76_RS08125 | Not Available | Positive | 1662281 - 1663966 | 58280.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
