Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-binding protein | KR76_RS07980 | Not Available | Negative | 1637893 - 1638552 | 22420.6 |
| thioesterase family protein | KR76_RS07985 | Not Available | Negative | 1638574 - 1639341 | 27417.6 |
| glycerophosphodiester phosphodiesterase | KR76_RS07990 | Not Available | Positive | 1639473 - 1640630 | 41110.9 |
| hit family protein | KR76_RS07995 | Not Available | Positive | 1640937 - 1641353 | 14697.8 |
| duf429 domain-containing protein | KR76_RS08000 | Not Available | Positive | 1641350 - 1643137 | 65388.4 |
| sdr family nad(p)-dependent oxidoreductase | KR76_RS08005 | Not Available | Positive | 1643217 - 1643987 | 26672.8 |
| hypothetical protein | KR76_RS08010 | Not Available | Negative | 1644008 - 1644610 | 20139.2 |
| n-acetylmuramoyl-l-alanine amidase | KR76_RS27995 | Not Available | Negative | 1644610 - 1645182 | 20403.2 |
| duf3048 domain-containing protein | KR76_RS08020 | Not Available | Positive | 1645495 - 1646529 | 36070.3 |
| tetr/acrr family transcriptional regulator | KR76_RS08025 | Not Available | Negative | 1646557 - 1647291 | 26583.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
