Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mycofactocin-coupled sdr family oxidoreductase | KR76_RS07745 | Not Available | Positive | 1584126 - 1584995 | 30554.1 |
| zinc-binding dehydrogenase | KR76_RS07750 | Not Available | Positive | 1584988 - 1585932 | 32111.4 |
| duf1275 family protein | KR76_RS07755 | Not Available | Positive | 1585929 - 1586684 | 24604.5 |
| alpha/beta fold hydrolase | KR76_RS07760 | Not Available | Positive | 1586681 - 1587658 | 35396.9 |
| zinc-binding dehydrogenase | KR76_RS07765 | Not Available | Positive | 1587655 - 1588692 | 36127.5 |
| atpase, t2ss/t4p/t4ss family | KR76_RS07770 | Not Available | Positive | 1588794 - 1589552 | 27498.4 |
| mfs transporter | KR76_RS31340 | Not Available | Positive | 1589612 - 1590346 | 28118.1 |
| zinc ribbon domain-containing protein | KR76_RS30825 | Not Available | Positive | 1590363 - 1591169 | 30276.2 |
| hypothetical protein | KR76_RS07780 | Not Available | Positive | 1591298 - 1591633 | 12844.1 |
| hypothetical protein | KR76_RS29500 | Not Available | Positive | 1591855 - 1592427 | 22115.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
