Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavin-containing monooxygenase | KR76_RS07695 | Not Available | Negative | 1572332 - 1574101 | 63343.3 |
| dihydrodipicolinate synthase family protein | KR76_RS07700 | Not Available | Negative | 1574260 - 1575126 | 29897.2 |
| hypothetical protein | KR76_RS30075 | Not Available | Positive | 1575219 - 1575611 | 14549.0 |
| alpha/beta fold hydrolase | KR76_RS07710 | Not Available | Positive | 1575608 - 1576504 | 32465.4 |
| gntr family transcriptional regulator | KR76_RS07715 | Not Available | Negative | 1576501 - 1577175 | 24663.0 |
| gamma-glutamyltransferase family protein | KR76_RS07720 | Not Available | Negative | 1577259 - 1579043 | 62846.9 |
| sugar abc transporter substrate-binding protein | KR76_RS07725 | Not Available | Positive | 1579278 - 1580357 | 37342.6 |
| sugar abc transporter atp-binding protein | KR76_RS07730 | Not Available | Positive | 1580401 - 1581948 | 55408.9 |
| abc transporter permease | KR76_RS07735 | Not Available | Positive | 1581945 - 1582988 | 35478.8 |
| alpha/beta hydrolase | KR76_RS07740 | Not Available | Positive | 1583022 - 1584092 | 37085.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
