Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | KR76_RS07645 | Not Available | Positive | 1558668 - 1559900 | 45336.3 |
| abc-f family atp-binding cassette domain-containing protein | KR76_RS07650 | Not Available | Positive | 1559944 - 1561587 | 58765.8 |
| alkaline phosphatase d family protein | KR76_RS07655 | Not Available | Negative | 1561580 - 1563268 | 60935.7 |
| pfkb family carbohydrate kinase | KR76_RS07660 | Not Available | Positive | 1563383 - 1564495 | 38273.8 |
| pseudouridine-5'-phosphate glycosidase | KR76_RS07665 | Not Available | Positive | 1564492 - 1565424 | 32155.6 |
| mycofactocin-coupled sdr family oxidoreductase | KR76_RS07670 | Not Available | Negative | 1565421 - 1566254 | 28994.6 |
| acetoacetate--coa ligase | KR76_RS07675 | Not Available | Negative | 1566257 - 1568881 | 95779.5 |
| sugar abc transporter permease | KR76_RS07680 | Not Available | Negative | 1568926 - 1570143 | 41536.8 |
| atp-binding cassette domain-containing protein | KR76_RS07685 | Not Available | Negative | 1570140 - 1570919 | 27686.4 |
| sugar abc transporter substrate-binding protein | KR76_RS07690 | Not Available | Negative | 1571016 - 1572161 | 39916.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
