Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| matrixin family metalloprotease | KR76_RS07450 | Not Available | Positive | 1515376 - 1516122 | 26641.8 |
| duf1353 domain-containing protein | KR76_RS07455 | Not Available | Positive | 1516119 - 1517006 | 32074.0 |
| aldehyde dehydrogenase family protein | KR76_RS07460 | Not Available | Positive | 1517027 - 1518523 | 52679.9 |
| dmt family transporter | KR76_RS07465 | Not Available | Negative | 1518480 - 1519415 | 31501.9 |
| plp-dependent aminotransferase family protein | KR76_RS07470 | Not Available | Positive | 1519414 - 1520832 | 50073.5 |
| udgx family uracil-dna binding protein | KR76_RS07475 | Not Available | Positive | 1520851 - 1521501 | 23506.9 |
| hypothetical protein | KR76_RS07480 | Not Available | Positive | 1521585 - 1522103 | 18704.2 |
| hypothetical protein | KR76_RS07485 | Not Available | Negative | 1522107 - 1522841 | 26735.4 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | KR76_RS07490 | Not Available | Positive | 1522883 - 1524049 | 41408.8 |
| paqr family membrane homeostasis protein trha | KR76_RS07495 | Not Available | Negative | 1524034 - 1524774 | 26603.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
