Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 39 protein | KR76_RS07300 | Not Available | Negative | 1482024 - 1483148 | 39095.6 |
| thymidine phosphorylase | KR76_RS07305 | Not Available | Positive | 1483196 - 1484497 | 44908.8 |
| nad(p)/fad-dependent oxidoreductase | KR76_RS07310 | Not Available | Positive | 1484500 - 1485921 | 51662.4 |
| cupin domain-containing protein | KR76_RS07315 | Not Available | Positive | 1485918 - 1486250 | 11961.1 |
| duf1116 domain-containing protein | KR76_RS07320 | Not Available | Negative | 1486373 - 1487791 | 48999.7 |
| fdra family protein | KR76_RS07325 | Not Available | Negative | 1487788 - 1489263 | 48870.6 |
| duf2877 domain-containing protein | KR76_RS07330 | Not Available | Negative | 1489260 - 1490081 | 26974.6 |
| pucr family transcriptional regulator | KR76_RS07335 | Not Available | Positive | 1490201 - 1491427 | 44248.3 |
| uracil-xanthine permease family protein | KR76_RS07340 | Not Available | Positive | 1491574 - 1492938 | 46688.7 |
| fad binding domain-containing protein | KR76_RS07345 | Not Available | Positive | 1492935 - 1493804 | 30113.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
