Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase | KR76_RS07250 | Not Available | Positive | 1470045 - 1472210 | 77773.1 |
| methylmalonyl co-a mutase-associated gtpase meab | KR76_RS07255 | Not Available | Positive | 1472227 - 1473213 | 34284.1 |
| scyd/scye family protein | KR76_RS27960 | Not Available | Positive | 1473303 - 1474346 | 35679.0 |
| amidohydrolase | KR76_RS07265 | Not Available | Positive | 1474428 - 1475627 | 42219.3 |
| duf3060 domain-containing protein | KR76_RS07270 | Not Available | Positive | 1475664 - 1476161 | 16443.3 |
| abc transporter permease | KR76_RS07275 | Not Available | Negative | 1476165 - 1477451 | 44278.3 |
| abc transporter permease | KR76_RS07280 | Not Available | Negative | 1477448 - 1478710 | 43837.1 |
| abc transporter atp-binding protein | KR76_RS07285 | Not Available | Negative | 1478707 - 1480221 | 53927.2 |
| bmp family protein | KR76_RS07290 | Not Available | Negative | 1480353 - 1481435 | 38243.5 |
| cytidine deaminase | KR76_RS30815 | Not Available | Positive | 1481638 - 1482036 | 13583.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
