Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | KR76_RS07200 | Not Available | Negative | 1459619 - 1460533 | 33123.2 |
| duf1345 domain-containing protein | KR76_RS07205 | Not Available | Positive | 1460573 - 1461232 | 22601.6 |
| tetr/acrr family transcriptional regulator | KR76_RS07210 | Not Available | Positive | 1461280 - 1461879 | 20444.4 |
| alpha/beta fold hydrolase | KR76_RS07215 | Not Available | Positive | 1461876 - 1463681 | 63314.4 |
| crotonase/enoyl-coa hydratase family protein | KR76_RS07220 | Not Available | Negative | 1463678 - 1464445 | 26665.8 |
| amp-binding protein | KR76_RS07225 | Not Available | Negative | 1464442 - 1465947 | 53351.9 |
| tetr/acrr family transcriptional regulator | KR76_RS07230 | Not Available | Positive | 1466019 - 1466603 | 20549.9 |
| glycosyltransferase | KR76_RS07235 | Not Available | Negative | 1466579 - 1467631 | 37089.6 |
| hypothetical protein | KR76_RS07240 | Not Available | Negative | 1467695 - 1468150 | 16785.3 |
| methylmalonyl-coa mutase family protein | KR76_RS07245 | Not Available | Positive | 1468324 - 1470048 | 60462.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
