Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase | KR76_RS07150 | Not Available | Positive | 1447337 - 1450615 | 119342.0 |
| 4fe-4s dicluster domain-containing protein | KR76_RS07155 | Not Available | Positive | 1450615 - 1451556 | 33202.6 |
| nrfd/psrc family molybdoenzyme membrane anchor subunit | KR76_RS07160 | Not Available | Positive | 1451556 - 1452635 | 37471.8 |
| hypothetical protein | KR76_RS07165 | Not Available | Positive | 1452743 - 1453246 | 18621.4 |
| selenide, water dikinase seld | KR76_RS07170 | Not Available | Negative | 1453394 - 1454389 | 33730.5 |
| Trna-sec(p) | Not Available | Not Available | Positive | 1454427 - 1454522 | Not Available |
| l-seryl-trna(sec) selenium transferase | KR76_RS07180 | Not Available | Positive | 1454553 - 1455794 | 42876.5 |
| selenocysteine-specific translation elongation factor | KR76_RS07185 | Not Available | Positive | 1455794 - 1457587 | 62158.5 |
| rhodanese-like domain-containing protein | KR76_RS07190 | Not Available | Negative | 1457584 - 1457985 | 14181.0 |
| ofa family mfs transporter | KR76_RS07195 | Not Available | Negative | 1458109 - 1459485 | 47930.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
