Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper resistance protein copc | KR76_RS07095 | Not Available | Positive | 1435257 - 1435838 | 19198.5 |
| cytochrome c oxidase assembly protein | KR76_RS07100 | Not Available | Positive | 1435835 - 1437805 | 69062.8 |
| adenylate/guanylate cyclase domain-containing protein | KR76_RS27955 | Not Available | Negative | 1437808 - 1439091 | 46066.2 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | KR76_RS07115 | Not Available | Negative | 1439341 - 1440084 | 26543.6 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | KR76_RS07120 | Not Available | Negative | 1440096 - 1442120 | 74963.3 |
| succinate dehydrogenase cytochrome b subunit | KR76_RS07125 | Not Available | Negative | 1442134 - 1442775 | 23143.7 |
| dyp-type peroxidase | KR76_RS31085 | Not Available | Negative | 1442950 - 1443078 | 4529.28 |
| dyp-type peroxidase | KR76_RS07130 | Not Available | Negative | 1443018 - 1443926 | 32307.9 |
| fdhf/ydep family oxidoreductase | KR76_RS07135 | Not Available | Positive | 1444036 - 1446342 | 83195.6 |
| fusc family protein | KR76_RS07140 | Not Available | Positive | 1446326 - 1447327 | 33710.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
