Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | KR76_RS07045 | Not Available | Positive | 1424400 - 1427924 | 124691.0 |
| mfs transporter | KR76_RS07050 | Not Available | Positive | 1427966 - 1429216 | 42090.3 |
| duf4328 domain-containing protein | KR76_RS07055 | Not Available | Negative | 1429158 - 1429829 | 24063.4 |
| tryptophan--trna ligase | KR76_RS07060 | Not Available | Positive | 1429906 - 1430994 | 39864.6 |
| 2'-5' rna ligase family protein | KR76_RS07065 | Not Available | Positive | 1430994 - 1431500 | 18576.8 |
| yihy/virulence factor brkb family protein | KR76_RS07070 | Not Available | Positive | 1431497 - 1432546 | 36483.2 |
| sco4848 family membrane protein | KR76_RS07075 | Not Available | Positive | 1432582 - 1432809 | 8271.06 |
| hypothetical protein | KR76_RS07080 | Not Available | Positive | 1432816 - 1433409 | 19928.1 |
| copper chaperone pcu(a)c | KR76_RS07085 | Not Available | Positive | 1433474 - 1434001 | 17529.4 |
| dyp-type peroxidase | KR76_RS07090 | Not Available | Positive | 1434001 - 1435260 | 44924.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
