Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6350 family protein | KR76_RS06995 | Not Available | Positive | 1413034 - 1414353 | 45070.3 |
| phosphoribosylglycinamide formyltransferase | KR76_RS07000 | Not Available | Positive | 1414380 - 1414994 | 21562.8 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | KR76_RS07005 | Not Available | Positive | 1415119 - 1416699 | 55283.2 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | KR76_RS07010 | Not Available | Positive | 1416938 - 1417813 | 30209.5 |
| duf3017 domain-containing protein | KR76_RS07015 | Not Available | Positive | 1417828 - 1418139 | 10556.4 |
| malate dehydrogenase | KR76_RS07020 | Not Available | Negative | 1418395 - 1419381 | 33862.0 |
| hypothetical protein | KR76_RS07025 | Not Available | Positive | 1419479 - 1420132 | 22083.3 |
| mip/aquaporin family protein | KR76_RS07030 | Not Available | Negative | 1420224 - 1421276 | 35682.6 |
| nadp-dependent isocitrate dehydrogenase | KR76_RS07035 | Not Available | Positive | 1421458 - 1423647 | 77596.6 |
| dna alkylation repair protein | KR76_RS07040 | Not Available | Positive | 1423662 - 1424315 | 24667.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
