Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | KR76_RS06945 | Not Available | Negative | 1399326 - 1400378 | 38075.4 |
| dna helicase pcra | KR76_RS06950 | Not Available | Positive | 1400724 - 1403144 | 89643.9 |
| hypothetical protein | KR76_RS06955 | Not Available | Negative | 1403254 - 1404435 | 41352.0 |
| m23 family metallopeptidase | KR76_RS30470 | Not Available | Negative | 1404485 - 1405615 | 38424.0 |
| adp-forming succinate--coa ligase subunit beta | KR76_RS06965 | Not Available | Positive | 1405947 - 1407113 | 41090.8 |
| succinate--coa ligase subunit alpha | KR76_RS06970 | Not Available | Positive | 1407133 - 1408029 | 30553.8 |
| hypothetical protein | KR76_RS06975 | Not Available | Negative | 1408093 - 1408791 | 23916.8 |
| hypothetical protein | KR76_RS06980 | Not Available | Negative | 1408840 - 1410318 | 51247.2 |
| rna polymerase sigma factor | KR76_RS06985 | Not Available | Negative | 1410311 - 1410820 | 18556.9 |
| sigma factor-like helix-turn-helix dna-binding protein | KR76_RS27950 | Not Available | Negative | 1410965 - 1412908 | 68758.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
