Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | KR76_RS06895 | Not Available | Negative | 1390747 - 1391895 | 42002.1 |
| llm class f420-dependent oxidoreductase | KR76_RS06900 | Not Available | Negative | 1391895 - 1392932 | 36950.4 |
| nadph-dependent f420 reductase | KR76_RS06905 | Not Available | Positive | 1393097 - 1393798 | 23686.0 |
| ybak/ebsc family protein | KR76_RS06910 | Not Available | Negative | 1393817 - 1394374 | 18975.1 |
| hypothetical protein | KR76_RS06915 | Not Available | Negative | 1394397 - 1394744 | 12538.7 |
| pspc domain-containing protein | KR76_RS31210 | Not Available | Negative | 1394741 - 1395955 | 41912.6 |
| atp-binding protein | KR76_RS06925 | Not Available | Positive | 1396100 - 1397413 | 46252.8 |
| response regulator transcription factor | KR76_RS06930 | Not Available | Positive | 1397406 - 1398065 | 23581.1 |
| m15 family metallopeptidase | KR76_RS06935 | Not Available | Positive | 1398038 - 1398922 | 30895.7 |
| hypothetical protein | KR76_RS06940 | Not Available | Positive | 1398953 - 1399312 | 12293.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
