Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease/exonuclease/phosphatase family protein | KR76_RS06845 | Not Available | Positive | 1377640 - 1378854 | 43480.6 |
| duf5709 domain-containing protein | KR76_RS06850 | Not Available | Negative | 1378877 - 1379290 | 14500.9 |
| duf4126 domain-containing protein | KR76_RS06855 | Not Available | Positive | 1379334 - 1379912 | 20124.4 |
| rok family transcriptional regulator | KR76_RS06860 | Not Available | Negative | 1379967 - 1381124 | 39063.8 |
| substrate-binding domain-containing protein | KR76_RS06865 | Not Available | Positive | 1381278 - 1382360 | 37712.1 |
| atp-binding cassette domain-containing protein | KR76_RS06870 | Not Available | Positive | 1382360 - 1383172 | 28287.1 |
| sugar abc transporter permease | KR76_RS06875 | Not Available | Positive | 1383169 - 1384413 | 43056.1 |
| bifunctional fo biosynthesis protein cofgh | KR76_RS06880 | Not Available | Negative | 1384410 - 1386968 | 92156.5 |
| hypothetical protein | KR76_RS06885 | Not Available | Negative | 1387041 - 1388066 | 36000.6 |
| mmpl family transporter | KR76_RS06890 | Not Available | Negative | 1388397 - 1390553 | 75605.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
