Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucosamine mutase | KR76_RS06600 | Not Available | Positive | 1316942 - 1318306 | 46490.6 |
| abc transporter atp-binding protein | KR76_RS06605 | Not Available | Positive | 1318336 - 1319235 | 31792.2 |
| abc transporter permease | KR76_RS06610 | Not Available | Positive | 1319232 - 1320023 | 27388.4 |
| hypothetical protein | KR76_RS06615 | Not Available | Positive | 1320091 - 1322316 | 76402.6 |
| serine/threonine-protein kinase | KR76_RS27935 | Not Available | Positive | 1322327 - 1324024 | 60046.7 |
| hypothetical protein | KR76_RS06625 | Not Available | Negative | 1324095 - 1324769 | 22851.0 |
| type i pantothenate kinase | KR76_RS06630 | Not Available | Negative | 1324837 - 1325826 | 37041.2 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | KR76_RS06635 | Not Available | Positive | 1325974 - 1327818 | 67046.2 |
| holo-acp synthase | KR76_RS06640 | Not Available | Positive | 1327823 - 1328176 | 12494.0 |
| nad(p)h-hydrate dehydratase | KR76_RS06645 | Not Available | Positive | 1328176 - 1329558 | 46022.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
