Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | KR76_RS06550 | Not Available | Positive | 1303874 - 1304926 | 36542.9 |
| abc transporter atp-binding protein | KR76_RS06555 | Not Available | Positive | 1304937 - 1305701 | 26830.7 |
| long-chain-fatty-acid--coa ligase | KR76_RS06560 | Not Available | Negative | 1305799 - 1307424 | 58834.7 |
| pls/posa family non-ribosomal peptide synthetase | KR76_RS06565 | Not Available | Positive | 1307526 - 1311386 | 134524.0 |
| m1 family metallopeptidase | KR76_RS06570 | Not Available | Positive | 1311393 - 1312694 | 47695.9 |
| uma2 family endonuclease | KR76_RS06575 | Not Available | Positive | 1312739 - 1313281 | 20282.0 |
| citrate synthase | KR76_RS06580 | Not Available | Negative | 1313354 - 1314643 | 48273.7 |
| bile acid:sodium symporter family protein | KR76_RS06585 | Not Available | Negative | 1314666 - 1315565 | 30799.5 |
| 50s ribosomal protein l13 | KR76_RS06590 | Not Available | Positive | 1315853 - 1316296 | 16123.7 |
| 30s ribosomal protein s9 | KR76_RS06595 | Not Available | Positive | 1316320 - 1316835 | 18488.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
