Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| simpl domain-containing protein | KR76_RS06500 | Not Available | Positive | 1295277 - 1295954 | 24591.8 |
| hypothetical protein | KR76_RS06505 | Not Available | Positive | 1295951 - 1296181 | 8717.14 |
| excalibur calcium-binding domain-containing protein | KR76_RS27930 | Not Available | Negative | 1296189 - 1296884 | 24723.7 |
| sige family rna polymerase sigma factor | KR76_RS06515 | Not Available | Positive | 1296983 - 1297552 | 20831.1 |
| hypothetical protein | KR76_RS06520 | Not Available | Positive | 1297545 - 1298603 | 36580.0 |
| abc-f family atp-binding cassette domain-containing protein | KR76_RS06525 | Not Available | Positive | 1298662 - 1300362 | 62184.5 |
| gnat family n-acetyltransferase | KR76_RS06530 | Not Available | Positive | 1300359 - 1301390 | 37186.8 |
| duf5302 domain-containing protein | KR76_RS06535 | Not Available | Positive | 1301431 - 1301613 | 6324.44 |
| s1c family serine protease | KR76_RS06540 | Not Available | Negative | 1301709 - 1302905 | 39390.0 |
| abc transporter permease | KR76_RS06545 | Not Available | Positive | 1303045 - 1303872 | 29478.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
