Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | KR76_RS06450 | Not Available | Negative | 1288334 - 1289128 | 27543.6 |
| molybdate abc transporter substrate-binding protein | KR76_RS06455 | Not Available | Negative | 1289136 - 1289930 | 27004.7 |
| molybdopterin-binding protein | KR76_RS06460 | Not Available | Negative | 1289930 - 1290346 | 14475.4 |
| duf4245 family protein | KR76_RS06465 | Not Available | Positive | 1290458 - 1291060 | 21431.2 |
| exodeoxyribonuclease vii small subunit | KR76_RS06470 | Not Available | Negative | 1291057 - 1291290 | 8410.45 |
| exodeoxyribonuclease vii large subunit | KR76_RS06475 | Not Available | Negative | 1291283 - 1292518 | 44839.6 |
| pfkb family carbohydrate kinase | KR76_RS06480 | Not Available | Positive | 1292542 - 1293498 | 31862.7 |
| hypothetical protein | KR76_RS06485 | Not Available | Positive | 1293538 - 1293747 | 7437.45 |
| trna pseudouridine(38-40) synthase trua | KR76_RS06490 | Not Available | Positive | 1293780 - 1294640 | 31117.2 |
| class i sam-dependent methyltransferase | KR76_RS06495 | Not Available | Positive | 1294637 - 1295236 | 21038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
