Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | KR76_RS06400 | Not Available | Positive | 1278622 - 1279899 | 44954.3 |
| carbohydrate abc transporter permease | KR76_RS06405 | Not Available | Positive | 1279896 - 1280840 | 34837.1 |
| carbohydrate abc transporter permease | KR76_RS06410 | Not Available | Positive | 1280842 - 1281684 | 30367.5 |
| abc transporter atp-binding protein | KR76_RS06415 | Not Available | Positive | 1281692 - 1282909 | 44303.9 |
| alpha/beta fold hydrolase | KR76_RS06420 | Not Available | Negative | 1282917 - 1283828 | 32396.3 |
| alpha/beta fold hydrolase | KR76_RS06425 | Not Available | Positive | 1283887 - 1284717 | 29506.8 |
| duf981 family protein | KR76_RS06430 | Not Available | Negative | 1284727 - 1285458 | 25484.8 |
| tetr family transcriptional regulator | KR76_RS27925 | Not Available | Positive | 1285571 - 1286182 | 21238.5 |
| class ii fructose-bisphosphatase | KR76_RS06440 | Not Available | Negative | 1286255 - 1287268 | 35374.2 |
| sulfate/molybdate abc transporter atp-binding protein | KR76_RS06445 | Not Available | Negative | 1287294 - 1288337 | 35739.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
