Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp2c family protein-serine/threonine phosphatase | KR76_RS06200 | Not Available | Positive | 1239782 - 1240621 | 28983.9 |
| hypothetical protein | KR76_RS30460 | Not Available | Positive | 1240618 - 1242267 | 54247.2 |
| rdd family protein | KR76_RS06210 | Not Available | Positive | 1242331 - 1243521 | 40551.0 |
| gnat family n-acetyltransferase | KR76_RS06215 | Not Available | Negative | 1243518 - 1244126 | 21917.1 |
| cold-shock protein | KR76_RS06220 | Not Available | Positive | 1244207 - 1244602 | 14451.3 |
| mfs transporter | KR76_RS06225 | Not Available | Negative | 1244624 - 1246072 | 49490.9 |
| duf3027 domain-containing protein | KR76_RS06230 | Not Available | Positive | 1246141 - 1246935 | 28441.5 |
| class i sam-dependent methyltransferase | KR76_RS06235 | Not Available | Negative | 1247127 - 1247750 | 21756.9 |
| duf2530 domain-containing protein | KR76_RS06240 | Not Available | Negative | 1247743 - 1248033 | 10967.2 |
| marr family transcriptional regulator | KR76_RS31135 | Not Available | Positive | 1248127 - 1248576 | 16817.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
