Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | KR76_RS06150 | Not Available | Negative | 1227769 - 1228674 | 32296.0 |
| lysr family transcriptional regulator | KR76_RS06155 | Not Available | Negative | 1228829 - 1229731 | 32066.8 |
| thiolase family protein | KR76_RS06160 | Not Available | Positive | 1229804 - 1230988 | 40736.2 |
| 3-oxoacid coa-transferase subunit a | KR76_RS06165 | Not Available | Positive | 1230988 - 1231683 | 24356.2 |
| 3-oxoacid coa-transferase subunit b | KR76_RS06170 | Not Available | Positive | 1231680 - 1232342 | 22995.5 |
| duf2087 domain-containing protein | KR76_RS06175 | Not Available | Positive | 1232339 - 1232611 | 10642.6 |
| endopeptidase la | KR76_RS06180 | Not Available | Positive | 1232674 - 1235037 | 83948.7 |
| uma2 family endonuclease | KR76_RS06185 | Not Available | Positive | 1235213 - 1235755 | 19020.7 |
| dna repair helicase xpb | KR76_RS06190 | Not Available | Negative | 1235780 - 1237441 | 61071.7 |
| helicase-associated domain-containing protein | KR76_RS06195 | Not Available | Negative | 1237451 - 1239526 | 71995.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
