Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | KR76_RS06100 | Not Available | Negative | 1219232 - 1219906 | 23530.6 |
| hypothetical protein | KR76_RS06105 | Not Available | Positive | 1219972 - 1220445 | 17653.7 |
| chorismate mutase | KR76_RS06110 | Not Available | Positive | 1220452 - 1220766 | 11499.8 |
| bile acid:sodium symporter family protein | KR76_RS06115 | Not Available | Positive | 1221049 - 1221969 | 31757.1 |
| marr family winged helix-turn-helix transcriptional regulator | KR76_RS06120 | Not Available | Negative | 1221975 - 1222415 | 15511.5 |
| arylsulfatase | KR76_RS06125 | Not Available | Positive | 1222438 - 1224720 | 81523.8 |
| alpha/beta fold hydrolase | KR76_RS06130 | Not Available | Negative | 1224684 - 1225496 | 27833.0 |
| muconolactone delta-isomerase | KR76_RS06135 | Not Available | Negative | 1225505 - 1225780 | 10632.7 |
| catechol 1,2-dioxygenase | KR76_RS06140 | Not Available | Negative | 1225780 - 1226634 | 30794.7 |
| mandelate racemase/muconate lactonizing enzyme family protein | KR76_RS06145 | Not Available | Negative | 1226658 - 1227761 | 39458.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
