Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | KR76_RS05850 | Not Available | Negative | 1171478 - 1172959 | 50805.8 |
| marr family winged helix-turn-helix transcriptional regulator | KR76_RS05855 | Not Available | Positive | 1173047 - 1173430 | 13984.7 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | KR76_RS05860 | Not Available | Negative | 1173427 - 1173843 | 14878.8 |
| hypothetical protein | KR76_RS05865 | Not Available | Negative | 1173858 - 1174478 | 22180.6 |
| gluconokinase | KR76_RS05870 | Not Available | Positive | 1174536 - 1175009 | 16783.6 |
| gntp family permease | KR76_RS05875 | Not Available | Positive | 1175006 - 1176364 | 45822.2 |
| fad-dependent oxidoreductase | KR76_RS05880 | Not Available | Positive | 1176397 - 1178088 | 60159.9 |
| hemerythrin domain-containing protein | KR76_RS05885 | Not Available | Positive | 1178085 - 1178639 | 20644.2 |
| sco6745 family protein | KR76_RS05890 | Not Available | Positive | 1178636 - 1179520 | 30871.8 |
| had family hydrolase | KR76_RS05895 | Not Available | Negative | 1179486 - 1180532 | 36467.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
