Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | KR76_RS05750 | Not Available | Positive | 1150095 - 1150913 | 28817.9 |
| llm class flavin-dependent oxidoreductase | KR76_RS05755 | Not Available | Positive | 1150910 - 1151731 | 29572.2 |
| atp-dependent dna helicase | KR76_RS05760 | Not Available | Positive | 1151792 - 1153804 | 71688.3 |
| mxan_6640 family putative metalloprotease | KR76_RS30065 | Not Available | Negative | 1153782 - 1155365 | 56446.8 |
| transcriptional repressor lexa | KR76_RS05770 | Not Available | Negative | 1155425 - 1156180 | 27182.4 |
| lysm peptidoglycan-binding domain-containing protein | KR76_RS05775 | Not Available | Positive | 1156486 - 1156869 | 13031.7 |
| hypothetical protein | KR76_RS05780 | Not Available | Negative | 1157266 - 1157595 | 11322.1 |
| transcriptional regulator nrdr | KR76_RS05785 | Not Available | Positive | 1157981 - 1158499 | 18681.1 |
| vitamin b12-dependent ribonucleotide reductase | KR76_RS05790 | Not Available | Positive | 1158622 - 1161513 | 104424.0 |
| hypothetical protein | KR76_RS27915 | Not Available | Positive | 1161670 - 1163214 | 55370.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
