Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | KR76_RS05700 | Not Available | Negative | 1139860 - 1140549 | 23281.7 |
| phospholipase d-like domain-containing protein | KR76_RS05705 | Not Available | Positive | 1140725 - 1142113 | 51403.3 |
| diaminopimelate epimerase | KR76_RS05710 | Not Available | Positive | 1142145 - 1142975 | 28529.9 |
| sdr family nad(p)-dependent oxidoreductase | KR76_RS05715 | Not Available | Positive | 1143044 - 1143820 | 26152.4 |
| hypothetical protein | KR76_RS05720 | Not Available | Negative | 1143926 - 1144474 | 18877.2 |
| alkaline phosphatase | KR76_RS05725 | Not Available | Positive | 1144655 - 1146289 | 60534.4 |
| hypothetical protein | KR76_RS05730 | Not Available | Negative | 1146264 - 1146695 | 15300.1 |
| gtpase hflx | KR76_RS05735 | Not Available | Positive | 1146833 - 1148374 | 55518.1 |
| sgnh/gdsl hydrolase family protein | KR76_RS05740 | Not Available | Positive | 1148461 - 1149153 | 23739.5 |
| lysr family transcriptional regulator | KR76_RS05745 | Not Available | Negative | 1149125 - 1150015 | 31417.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
