Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antitoxin | KR76_RS05650 | Not Available | Negative | 1129906 - 1130109 | 7000.86 |
| antitoxin | KR76_RS05655 | Not Available | Negative | 1130179 - 1130433 | 8744.97 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | KR76_RS05660 | Not Available | Positive | 1130495 - 1131445 | 34042.9 |
| phytoene desaturase family protein | KR76_RS05665 | Not Available | Negative | 1131474 - 1132907 | 49947.4 |
| duf3556 domain-containing protein | KR76_RS05670 | Not Available | Negative | 1132904 - 1134760 | 68508.0 |
| class i adenylate-forming enzyme family protein | KR76_RS05675 | Not Available | Negative | 1134762 - 1136186 | 49838.1 |
| pucr family transcriptional regulator | KR76_RS05680 | Not Available | Positive | 1136355 - 1137599 | 44924.6 |
| helix-turn-helix domain-containing protein | KR76_RS05685 | Not Available | Positive | 1137723 - 1138637 | 33764.4 |
| dihydrofolate reductase family protein | KR76_RS05690 | Not Available | Positive | 1138634 - 1139203 | 20605.2 |
| msmeg_1061 family fmn-dependent ppox-type flavoprotein | KR76_RS05695 | Not Available | Positive | 1139200 - 1139850 | 23922.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
