Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Propionibacteriales
Family
Nocardioidaceae
Genus
Pimelobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Propionibacteriales |
| Family | Nocardioidaceae |
| Genus | Pimelobacter |
| Species | Pimelobacter simplex |
| Strain | VKM Ac-2033D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deteriorated mural paintings; oil contaminated soil; oil-contaminated sea sediment; pine tree rhizosphere; pine tree roots; soil |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Triticum aestivum, Solanum lycopersicum |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
766420 bp
Thymine Count
764112 bp
Guanine Count
2042448 bp
Cytosine Count
2064380 bp
Genome Length
5637360 bp
Protein-coding Genes
5473 genes
Non-Coding Genes
148 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | KR76_RS05465 | Not Available | Positive | 1092271 - 1093011 | 25711.1 |
| hypothetical protein | KR76_RS05470 | Not Available | Positive | 1093008 - 1094252 | 43179.4 |
| hypothetical protein | KR76_RS05475 | Not Available | Positive | 1094237 - 1094875 | 21855.4 |
| chemotaxis protein chea | KR76_RS05480 | Not Available | Positive | 1094958 - 1097123 | 76789.9 |
| chemotaxis protein chew | KR76_RS05485 | Not Available | Positive | 1097120 - 1097587 | 16598.0 |
| methyl-accepting chemotaxis protein | KR76_RS27905 | Not Available | Positive | 1097584 - 1099869 | 79933.9 |
| response regulator transcription factor | KR76_RS05495 | Not Available | Negative | 1099968 - 1100717 | 26237.8 |
| hypothetical protein | KR76_RS05500 | Not Available | Negative | 1100843 - 1101202 | 13187.5 |
| sigma-70 family rna polymerase sigma factor | KR76_RS05505 | Not Available | Positive | 1101446 - 1102294 | 30972.0 |
| cdgsh iron-sulfur domain-containing protein | KR76_RS05510 | Not Available | Negative | 1102370 - 1102570 | 7125.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
