Streptomyces rimosus

Gram-positive

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Kitasatosporales

Family

Streptomycetaceae

Genus

Streptomyces

Description

**Streptomyces rimosus** is a Gram-positive bacterium primarily found in soil environments. This actinobacterium is notable for its filamentous morphology, which is characteristic of the genus Streptomyces. As a member of this group, **S. rimosus** plays a significant role in soil ecology, contributing to the decomposition of organic matter and nutrient cycling. One of the defining traits of **S. rimosus** is its ability to produce a variety of secondary metabolites, including antibiotics such as oxytetracycline, which have important applications in medicine and agriculture. This metabolic versatility underscores its ecological role as a competitive organism within its habitat, where it may inhibit the growth of other microorganisms through the production of these bioactive compounds. The presence of **S. rimosus** in soil not only highlights its potential for biotechnological applications but also emphasizes the importance of actinobacteria in maintaining soil health and fertility. By mediating interactions within the microbial community, **S. rimosus** may influence the dynamics of microbial diversity and succession in terrestrial ecosystems, illustrating the intricate relationships between soil microorganisms and their environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderKitasatosporales
FamilyStreptomycetaceae
GenusStreptomyces
SpeciesStreptomyces rimosus
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Streptomyces rimosus
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Streptomyces rimosus strain WT5260 chromosome, complete genome.

Gene Summary

Adenine Count

1317804 bp

Thymine Count

1308615 bp

Guanine Count

3370739 bp

Cytosine Count

3368741 bp

Genome Length

9365899 bp

Protein-coding Genes

8086 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal recognition particle proteinCTZ40_RS11075Not AvailableNegative2736407 - 273796355634.4
[protein-pii] uridylyltransferaseCTZ40_RS11080Not AvailableNegative2739285 - 2742326106743.0
p-ii family nitrogen regulatorCTZ40_RS11085Not AvailableNegative2742647 - 274298512226.7
ammonium transporterCTZ40_RS11090Not AvailableNegative2742982 - 274442449019.8
hypothetical proteinCTZ40_RS11095Not AvailableNegative2744882 - 274629452141.1
bifunctional dna primase/polymeraseCTZ40_RS11100Not AvailablePositive2747637 - 274830522890.4
signal recognition particle-docking protein ftsyCTZ40_RS11105Not AvailableNegative2748478 - 274970742861.4
hypothetical proteinCTZ40_RS42815Not AvailablePositive2750509 - 275097015937.7
purine-cytosine permease family proteinCTZ40_RS11115Not AvailablePositive2751177 - 275265852196.6
llm class flavin-dependent oxidoreductaseCTZ40_RS11120Not AvailablePositive2752751 - 275374035906.9

Displaying genes 2371 – 2380 of 8252 in total

Metabolites

15 records
Metabolite IDMetabolite nameStructureCAS number
BASm00027675a,11a-dehydrotetracyclineC22H22N2O8Chemical structure of 5a,11a-dehydrotetracyclineNot available
Average442.424Da
Monoisotopic442.1376157Da
BASm0003148anhydrotetracyclineC22H22N2O7Chemical structure of anhydrotetracyclineNot available
Average426.4193Da
Monoisotopic426.142701068Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00034237-phospho-2-dehydro-3-deoxy-D-arabino-heptonateC7H10O10PChemical structure of 7-phospho-2-dehydro-3-deoxy-D-arabino-heptonateNot available
Average285.122Da
Monoisotopic285.0028043Da
BASm00083056-methylpretetramideC20H14NO6Not availableNot available
Average364.334Da
Monoisotopic364.082660755Da
BASm00083195a,11a-dehydrooxytetracyclineC22H22N2O9Chemical structure of 5a,11a-dehydrooxytetracyclineNot available
Average458.423Da
Monoisotopic458.132530296Da
BASm00084364-amino-4-dedimethylamino-anhydrotetracyclineC20H18N2O7Chemical structure of 4-amino-4-dedimethylamino-anhydrotetracyclineNot available
Average398.371Da
Monoisotopic398.111400928Da
BASm0014412TetrangulolC19H12O4Chemical structure of TetrangulolNULL
Average304.301Da
Monoisotopic304.073558866Da
BASm0014873Coenzyme F420C29H36N5O18PNot availableNULL
Average773.598Da
Monoisotopic773.179296337Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da

Displaying 1–10 of 15 metabolites

Health Effects

No health effects information available for this bacterium.