Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | YYL |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus ruber strain YYL chromosome, complete genome.
Gene Summary
Adenine Count
824813 bp
Thymine Count
825075 bp
Guanine Count
1973879 bp
Cytosine Count
1968425 bp
Genome Length
5592192 bp
Protein-coding Genes
5053 genes
Non-Coding Genes
224 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (fe-s)-binding protein | CSW53_RS26460 | Not Available | Positive | 141 - 746 | 21317.6 |
| nramp family divalent metal transporter | CSW53_RS28430 | Not Available | Negative | 997 - 1451 | 16456.0 |
| hypothetical protein | CSW53_RS26475 | Not Available | Negative | 2037 - 2402 | 12722.7 |
| nramp family divalent metal transporter | CSW53_RS26480 | Not Available | Positive | 2539 - 4120 | 57941.7 |
| nramp family divalent metal transporter | CSW53_RS26485 | Not Available | Positive | 4117 - 4482 | 13105.5 |
| o-methyltransferase | CSW53_RS26490 | Not Available | Positive | 4560 - 5177 | 22214.2 |
| sdr family oxidoreductase | CSW53_RS26495 | Not Available | Negative | 5231 - 6016 | 26895.6 |
| tn3 family transposase | CSW53_RS26500 | Not Available | Negative | 6090 - 9083 | 110811.0 |
| nramp family divalent metal transporter | CSW53_RS26505 | Not Available | Negative | 9177 - 9497 | 11229.7 |
| aldehyde dehydrogenase family protein | CSW53_RS26510 | Not Available | Negative | 9760 - 11148 | 49698.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


