Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | R1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus ruber strain R1 plasmid unnamed2, complete sequence.
Gene Summary
Adenine Count
4793 bp
Thymine Count
5098 bp
Guanine Count
11390 bp
Cytosine Count
11735 bp
Genome Length
33016 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | E2561_RS22885 | Not Available | Positive | 5040338 - 5041333 | 34588.0 |
| type ii 3-dehydroquinate dehydratase | E2561_RS22890 | Not Available | Positive | 5041389 - 5041847 | 16153.2 |
| sugar phosphate isomerase/epimerase and 4-hydroxyphenylpyruvate domain-containing protein | E2561_RS22895 | Not Available | Positive | 5041989 - 5043818 | 66044.1 |
| nad-dependent epimerase/dehydratase family protein | E2561_RS22900 | Not Available | Negative | 5043825 - 5044829 | 35455.1 |
| mbl fold metallo-hydrolase | E2561_RS22905 | Not Available | Positive | 5044955 - 5045956 | 35742.4 |
| terd family protein | E2561_RS22910 | Not Available | Negative | 5046002 - 5046682 | 23676.2 |
| duf475 domain-containing protein | E2561_RS22915 | Not Available | Negative | 5046764 - 5047852 | 38984.3 |
| terd family protein | E2561_RS22920 | Not Available | Negative | 5047977 - 5048552 | 20401.5 |
| hypothetical protein | E2561_RS22925 | Not Available | Positive | 5048786 - 5049907 | 40624.6 |
| hpch/hpai aldolase/citrate lyase family protein | E2561_RS22930 | Not Available | Positive | 5049904 - 5051094 | 42870.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


