Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | R1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus ruber strain R1 plasmid unnamed2, complete sequence.
Gene Summary
Adenine Count
4793 bp
Thymine Count
5098 bp
Guanine Count
11390 bp
Cytosine Count
11735 bp
Genome Length
33016 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1254 domain-containing protein | E2561_RS21105 | Not Available | Negative | 4682953 - 4684374 | 51989.2 |
| ferritin-like domain-containing protein | E2561_RS21110 | Not Available | Positive | 4684658 - 4685302 | 22679.9 |
| sensor histidine kinase | E2561_RS21115 | Not Available | Negative | 4685387 - 4686514 | 39766.7 |
| response regulator transcription factor | E2561_RS21120 | Not Available | Negative | 4686511 - 4687209 | 25415.6 |
| apc family permease | E2561_RS21125 | Not Available | Positive | 4687448 - 4688791 | 46697.6 |
| four-helix bundle copper-binding protein | E2561_RS21130 | Not Available | Negative | 4688868 - 4689275 | 14149.7 |
| potassium channel family protein | E2561_RS21135 | Not Available | Negative | 4689429 - 4690328 | 32151.2 |
| duf2254 domain-containing protein | E2561_RS21140 | Not Available | Negative | 4690313 - 4691698 | 49780.9 |
| cation:proton antiporter | E2561_RS21145 | Not Available | Negative | 4691832 - 4693064 | 42222.6 |
| pas domain s-box protein | E2561_RS21150 | Not Available | Negative | 4693095 - 4694576 | 54745.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


