Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus ruber |
| Strain | R1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus ruber strain R1 plasmid unnamed2, complete sequence.
Gene Summary
Adenine Count
4793 bp
Thymine Count
5098 bp
Guanine Count
11390 bp
Cytosine Count
11735 bp
Genome Length
33016 bp
Protein-coding Genes
33 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | E2561_RS11545 | Not Available | Positive | 2529464 - 2530714 | 45172.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | E2561_RS11550 | Not Available | Positive | 2530715 - 2531197 | 16491.7 |
| ph domain-containing protein | E2561_RS11555 | Not Available | Positive | 2531194 - 2531667 | 16744.4 |
| excinuclease abc subunit uvrc | E2561_RS11560 | Not Available | Positive | 2531677 - 2533917 | 81398.0 |
| rnase adapter rapz | E2561_RS11565 | Not Available | Positive | 2533989 - 2534843 | 31095.0 |
| gluconeogenesis factor yvck family protein | E2561_RS11570 | Not Available | Positive | 2534840 - 2535895 | 36426.6 |
| dna-binding protein whia | E2561_RS11575 | Not Available | Positive | 2535892 - 2536869 | 34652.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | E2561_RS11580 | Not Available | Positive | 2537047 - 2538066 | 35814.7 |
| phosphoglycerate kinase | E2561_RS11585 | Not Available | Positive | 2538087 - 2539313 | 42256.3 |
| triose-phosphate isomerase | E2561_RS11590 | Not Available | Positive | 2539315 - 2540097 | 27114.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


