Rhodococcus rhodochrous str. EP4

Gram-positiveCocciNon-motileAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus rhodochrous str. EP4 is a Gram-positive, coccoid bacterium that thrives in soil environments and is classified as an aerobic chemoheterotroph. This strain is characterized by its nonsporulating nature, which differentiates it from other members of the genus that may exhibit sporulation. As an aerobe, R. rhodochrous str. EP4 requires oxygen for growth, utilizing organic compounds as its primary energy source. The ecological role of R. rhodochrous str. EP4 in soil ecosystems is potentially significant, given its adaptation to aerobic conditions and its ability to metabolize a variety of organic substrates. This metabolic versatility suggests a capacity for participating in nutrient cycling and organic matter decomposition within its habitat. Additionally, the nonsporulating characteristic may reflect an ecological strategy that prioritizes growth and reproduction in stable environments where sporulation is less advantageous. Overall, the traits of R. rhodochrous str. EP4 highlight its specialized adaptations to soil habitats, contributing to the complex dynamics of microbial communities and their functions in terrestrial ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus rhodochrous
StrainEP4

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodococcus rhodochrous str. EP4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Rhodococcus rhodochrous strain EP4 chromosome.

Gene Summary

Adenine Count

916768 bp

Thymine Count

917635 bp

Guanine Count

1943172 bp

Cytosine Count

1939976 bp

Genome Length

5717651 bp

Protein-coding Genes

5159 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinC6369_RS14605Not AvailablePositive3174861 - 317525314067.2
sigma-70 family rna polymerase sigma factorC6369_RS14610Not AvailableNegative3175321 - 317621131652.7
carboxymuconolactone decarboxylase family proteinC6369_RS14615Not AvailablePositive3176287 - 317674816876.0
fumarate hydrataseC6369_RS14620Not AvailableNegative3176816 - 317851361393.2
cpbp family intramembrane glutamic endopeptidaseC6369_RS14625Not AvailablePositive3178795 - 317954426309.7
2'-5' rna ligase family proteinC6369_RS14630Not AvailablePositive3179544 - 318006819584.7
hypothetical proteinC6369_RS14635Not AvailableNegative3180076 - 31802918141.48
helix-turn-helix domain-containing proteinC6369_RS14640Not AvailableNegative3180376 - 318115528418.1
duf1330 domain-containing proteinC6369_RS14645Not AvailablePositive3181243 - 318158412523.6
g/u mismatch-specific dna glycosylaseC6369_RS14650Not AvailableNegative3181601 - 318216720107.9

Displaying genes 2961 – 2970 of 5237 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.