Bifidobacterium bifidum str. TMC 3115

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium bifidum strain TMC 3115 is a Gram-positive, nonsporulating rod-shaped bacterium that thrives in anaerobic environments, typically associated with the gastrointestinal tracts of various hosts. This species is part of the Bifidobacteriaceae family and is known for its role as a beneficial microbe within the gut microbiome, contributing to the maintenance of gut health and the modulation of the immune system. B. bifidum str. TMC 3115 is adapted to its host-associated habitat, where it engages in fermentative metabolism, utilizing carbohydrates to produce short-chain fatty acids that are pivotal for colonic health. Its anaerobic requirement indicates a preference for environments devoid of oxygen, which aligns with the conditions found in the intestines of mammals. The presence of B. bifidum in the gut microbiota is associated with various beneficial effects, including the enhancement of nutrient absorption and the inhibition of pathogenic microbes, although the precise mechanisms of action and the full spectrum of its interactions within the microbiome remain areas of ongoing research. Understanding the specialized adaptations of B. bifidum str. TMC 3115 enhances our knowledge of gut microbiota composition and its implications for host health, particularly in the context of probiotic applications and gut microbiome modulation.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium bifidum
StrainTMC 3115

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium bifidum str. TMC 3115
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Rodentia
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium bifidum strain TMC 3115 chromosome, complete

Gene Summary

Adenine Count

407115 bp

Thymine Count

403700 bp

Guanine Count

684818 bp

Cytosine Count

683261 bp

Genome Length

2178894 bp

Protein-coding Genes

1759 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
primosomal protein n'BBTM_RS04855Not AvailableNegative1119438 - 112013823455.1
f0f1 atp synthase subunit epsilonBBTM_RS04865Not AvailableNegative1120501 - 112080310584.5
f0f1 atp synthase subunit betaBBTM_RS04870Not AvailableNegative1120803 - 112228753787.5
f0f1 atp synthase subunit gammaBBTM_RS04875Not AvailableNegative1122296 - 112323434257.9
f0f1 atp synthase subunit alphaBBTM_RS04880Not AvailableNegative1123238 - 112491760524.1
f0f1 atp synthase subunit deltaBBTM_RS04885Not AvailableNegative1124991 - 112581830483.8
f0f1 atp synthase subunit bBBTM_RS04890Not AvailableNegative1125848 - 112637519073.7
atp synthase f0 subunit cBBTM_RS04895Not AvailableNegative1126429 - 11266597775.01
f0f1 atp synthase subunit aBBTM_RS04900Not AvailableNegative1126771 - 112758329828.5
homoserine o-succinyltransferaseBBTM_RS04905Not AvailableNegative1128114 - 112914839783.1

Displaying genes 971 – 980 of 1823 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
GhCausesPMC10522390

Displaying health effects 1 – 1 of 1 in total