Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium bifidum ATCC 29521 (also designated as JCM 1255 and DSM 20456) is a Gram-positive, non-sporulating, rod-shaped bacterium that is classified as an anaerobe, thriving in oxygen-depleted environments. This species is primarily associated with the gastrointestinal tract of various hosts, notably in humans, where it contributes to the complex microbiota. Bifidobacterium bifidum plays a crucial role in the digestion of dietary fibers, producing beneficial short-chain fatty acids through fermentation processes. As a member of the Bifidobacterium genus, B. bifidum is known for its ability to metabolize a wide range of carbohydrates, which supports its growth in the human gut and may influence gut health. Its presence is often linked to a balanced gut microbiome, and it has been studied for its potential probiotic benefits. The bacterium's anaerobic metabolism allows it to thrive in the intestinal environment, where it can coexist with other microbial species while contributing to the maintenance of gut homeostasis. Research indicates that B. bifidum may play a role in modulating the immune response and reinforcing the intestinal barrier, which adds to its significance in gut health. Its adaptation to host-associated environments highlights the intricate relationships between gut microbiota and host health, suggesting that B. bifidum may be a key player in promoting overall well-being through its metabolic activities and interactions within the gut ecosystem.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium bifidum
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456


Gene Summary

Adenine Count

411614 bp

Thymine Count

408866 bp

Guanine Count

688523 bp

Cytosine Count

689548 bp

Genome Length

2198551 bp

Protein-coding Genes

2109 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
5s ribosomal rnaNot AvailableNot Available+27 - 142Not Available
hypothetical proteinBIFBIF_00001Not Available+234 - 145143878.4
23s ribosomal rnaNot AvailableNot Available+325 - 3370Not Available
glycogen debranching enzyme glgxBIFBIF_00002Not Available-1527 - 369882370.3
16s ribosomal rnaNot AvailableNot Available+3833 - 5348Not Available
hydrolase, nudix familyBIFBIF_00003Not Available-3763 - 446125688.3
dinuclear metal center protein, ybgi familyBIFBIF_00004Not Available-4515 - 543232285.2
dna-directed dna polymeraseBIFBIF_00005Not Available-5485 - 8316102527.0
response regulator receiver domain proteinBIFBIF_00006Not Available-8313 - 908928580.2
Trna-leuNot AvailableNot Available+9199 - 9272Not Available

Displaying genes 1 – 10 of 2167 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites