Bifidobacterium bifidum str. BF3

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium bifidum strain BF3 is a Gram-positive, nonsporulating rod-shaped bacterium that thrives in anaerobic environments, primarily associated with host organisms. This strain, like other members of the Bifidobacterium genus, is typically found in the gastrointestinal tracts of mammals, where it plays a vital role in gut health and microbial balance. Bifidobacterium bifidum is known for its ability to ferment a variety of carbohydrates, contributing to the production of short-chain fatty acids, which are crucial for maintaining intestinal health and may exert beneficial effects on the host's immune system. The anaerobic nature of this bacterium highlights its adaptation to the microaerophilic conditions prevalent in the intestines, where it competes with other microbial species for nutrients and colonization sites. Given its habitat and physiological traits, Bifidobacterium bifidum strain BF3 may play an integral role in the modulation of gut microbiota composition and function. This could have implications for overall host health, particularly in the context of gut dysbiosis or during the administration of antibiotics, suggesting that maintaining or restoring populations of this strain may be beneficial in therapeutic applications aimed at enhancing gut microbiome resilience and functionality.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium bifidum
StrainBF3

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium bifidum str. BF3
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Rodentia
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium bifidum strain BF3 chromosome, complete genome.

Gene Summary

Adenine Count

411886 bp

Thymine Count

413751 bp

Guanine Count

692758 bp

Cytosine Count

691975 bp

Genome Length

2210370 bp

Protein-coding Genes

1789 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad-dependent oxidoreductaseRY70_RS00395Not AvailablePositive110465 - 11237866510.0
rna-binding domain-containing proteinRY70_RS00400Not AvailablePositive112487 - 11413359702.1
ofa family mfs transporterRY70_RS00405Not AvailableNegative114420 - 11570645900.1
phosphoenolpyruvate carboxylaseRY70_RS00410Not AvailableNegative116194 - 118950102460.0
threonine/serine exporter thre family proteinRY70_RS00415Not AvailablePositive119382 - 12135871153.8
gdsl-type esterase/lipase family proteinRY70_RS00420Not AvailableNegative121431 - 12256440886.9
hypothetical proteinRY70_RS00425Not AvailablePositive123095 - 12411438773.8
tryptophan--trna ligaseRY70_RS00430Not AvailableNegative124589 - 12568639905.9
duf3073 domain-containing proteinRY70_RS00435Not AvailablePositive125827 - 12620713582.0
lyttr family dna-binding domain-containing proteinRY70_RS09090Not AvailablePositive126371 - 12717129535.7

Displaying genes 81 – 90 of 1853 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
GhCausesPMC10522390

Displaying health effects 1 – 1 of 1 in total