Bifidobacterium bifidum str. BF3

Gram-positiveRodNon-motileAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium bifidum strain BF3 is a Gram-positive, nonsporulating rod-shaped bacterium that thrives in anaerobic environments, primarily associated with host organisms. This strain, like other members of the Bifidobacterium genus, is typically found in the gastrointestinal tracts of mammals, where it plays a vital role in gut health and microbial balance. Bifidobacterium bifidum is known for its ability to ferment a variety of carbohydrates, contributing to the production of short-chain fatty acids, which are crucial for maintaining intestinal health and may exert beneficial effects on the host's immune system. The anaerobic nature of this bacterium highlights its adaptation to the microaerophilic conditions prevalent in the intestines, where it competes with other microbial species for nutrients and colonization sites. Given its habitat and physiological traits, Bifidobacterium bifidum strain BF3 may play an integral role in the modulation of gut microbiota composition and function. This could have implications for overall host health, particularly in the context of gut dysbiosis or during the administration of antibiotics, suggesting that maintaining or restoring populations of this strain may be beneficial in therapeutic applications aimed at enhancing gut microbiome resilience and functionality.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium bifidum
StrainBF3

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Bifidobacterium bifidum str. BF3
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Rodentia
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium bifidum strain BF3 chromosome, complete genome.

Gene Summary

Adenine Count

411886 bp

Thymine Count

413751 bp

Guanine Count

692758 bp

Cytosine Count

691975 bp

Genome Length

2210370 bp

Protein-coding Genes

1789 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lpxtg cell wall anchor domain-containing proteinRY70_RS00105Not AvailableNegative32112 - 39818264126.0
helix-turn-helix domain-containing proteinRY70_RS00110Not AvailablePositive40435 - 4098620921.3
abc transporter atp-binding proteinRY70_RS00115Not AvailableNegative41162 - 4228940855.4
hypothetical proteinRY70_RS00120Not AvailableNegative42743 - 4365434593.1
serine/threonine-protein kinaseRY70_RS00125Not AvailablePositive44206 - 4667786184.8
thioredoxin domain-containing proteinRY70_RS00130Not AvailablePositive46828 - 4780235065.4
Trna-thrNot AvailableNot AvailablePositive47992 - 48065Not Available
g5 domain-containing proteinRY70_RS00140Not AvailablePositive48421 - 4990852560.4
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsmaRY70_RS00145Not AvailablePositive49920 - 5087033865.5
4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinaseRY70_RS00150Not AvailablePositive50867 - 5190736175.8

Displaying genes 21 – 30 of 1853 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
GhCausesPMC10522390

Displaying health effects 1 – 1 of 1 in total