Bacillus mycoides

Gram-positiveRodFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Bacillus

Description

Bacillus mycoides is a gram-positive, rod-shaped bacterium that thrives in a variety of environments. It is classified as a thermophilic organism, preferring temperatures between 50-60°C, which is characteristic of its ability to survive in hot and humid environments. Moreover, it is a heterotroph, obtaining its energy from the breakdown of organic compounds. Specifically, it produces energy through the process of oxidation-reduction, utilizing enzymes to catalyze the conversion of substrates into ATP. Bacillus mycoides is typically Gram-stained, meaning it retains the crystal violet dye, indicating the presence of a thick peptidoglycan layer in its cell wall. Its rod-shaped morphology allows it to adapt to a wide range of ecological niches, including soil, water, and decomposing organic matter. This microbe has been found in various body sites across different species, including the human gut, where it plays a crucial role in decomposition and nutrient cycling. In terms of its oxygen preference, Bacillus mycoides is a facultative anaerobe, capable of surviving in both aerobic and anaerobic conditions. This adaptability is likely a result of its ability to produce enzymes that can function in a variety of oxygen environments. One of the most striking features of Bacillus mycoides is its ability to produce a range of enzymes, including proteases, lipases, and amylases, which enable it to break down complex organic compounds. This enzymatic activity allows it to thrive in environments with limited nutrients, making it a key player in the decomposition process. In addition to its ecological significance, Bacillus mycoides has potential applications in biotechnology, particularly in the production of bioactive compounds and enzymes. Further research into this microbe's physiology and enzymatic capabilities may lead to the development of novel bioproducts and biocatalysts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusBacillus
SpeciesBacillus mycoides
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Bacillus mycoides
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangepsychrotolerant
Habitatdeep sea; Iheya Ridge hydrothermal vent field of Okinawa Trough
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNon-pathogenic

Gene Summary

Adenine Count

1776053 bp

Thymine Count

1765854 bp

Guanine Count

986156 bp

Cytosine Count

954551 bp

Genome Length

5482614 bp

Protein-coding Genes

5362 genes

Non-Coding Genes

121 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s ribosomal rnaNot AvailableNot AvailablePositive54 - 2982Not Available
d-glycerate dehydrogenaseCOL41_00010Not AvailablePositive120 - 110036429.8
5s ribosomal rnaNot AvailableNot AvailablePositive283 - 398Not Available
alpha/beta hydrolaseCOL41_00020Not AvailablePositive1363 - 220232241.0
duf1871 domain-containing proteinCOL41_00025Not AvailableNegative2268 - 25199469.43
cystathionine beta-lyaseCOL41_00030Not AvailablePositive2637 - 378843843.6
16s ribosomal rnaNot AvailableNot AvailablePositive3067 - 4622Not Available
superoxide dismutaseCOL41_00035Not AvailableNegative3906 - 444518980.7
kinaseCOL41_00040Not AvailablePositive4864 - 524714568.3
or 3'-5' exonuclease kapdCOL41_00045Not AvailableNegative5288 - 591123743.8

Displaying genes 1 – 10 of 22987 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

413 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm0001360methanesulfonateCH3O3SChemical structure of methanesulfonate59721-29-8
Average95.09Da
Monoisotopic94.980838711Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da

Displaying 1–10 of 413 metabolites

Health Effects

Health ConditionRelationReference
Food poisoningCausesPMC6842932
EmesisCausesPMC2783214

Displaying health effects 1 – 2 of 2 in total