Lactococcus raffinolactis str. WiKim0068

Gram-positiveCocciFacultative anaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Lactobacillales

Family

Streptococcaceae

Genus

Pseudolactococcus

Description

Lactococcus raffinolactis str. WiKim0068 is a Gram-positive coccus that is known to thrive in various fermented environments, including fermented cabbage, kimchi, and other fermented foods such as meat, milk, vegetables, and seeds. This strain is classified as a facultative anaerobe, indicating its ability to grow in both aerobic and anaerobic conditions, which is beneficial for its survival in diverse fermentation processes. The unique morphology of L. raffinolactis, characterized by its spherical shape, contributes to its role in the fermentation of a wide array of substrates. Its presence in foods such as kimchi highlights its potential significance in traditional fermentation practices, wherein it may contribute to the development of flavor profiles and preservation of nutrients. Moreover, the versatility of L. raffinolactis str. WiKim0068 in adapting to various habitats suggests potential applications in food biotechnology, particularly in the enhancement of fermented food products. Understanding the metabolic pathways and interactions of this strain within its ecological niches may provide insights into the development of novel fermentation strategies that leverage its unique traits for improved food quality and safety.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderLactobacillales
FamilyStreptococcaceae
GenusPseudolactococcus
SpeciesPseudolactococcus raffinolactis
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Lactococcus raffinolactis str. WiKim0068
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatfermented cabbage; fermented foods; fermented seeds; fish; kimchi; meat; milk; vegetables
Biotic relationshipNot Available
Host(s)Gambeya albida
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Lactococcus raffinolactis strain WiKim0068 plasmid pWiKim0068-2,

Gene Summary

Adenine Count

9173 bp

Thymine Count

8366 bp

Guanine Count

5251 bp

Cytosine Count

4275 bp

Genome Length

27065 bp

Protein-coding Genes

28 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
repb family plasmid replication initiator proteinCMV25_RS11205Not AvailablePositive11366 - 1264950368.3
para family proteinCMV25_RS11210Not AvailablePositive12767 - 1360932512.9
hypothetical proteinCMV25_RS11215Not AvailablePositive13714 - 139268179.91
is6-like element iss1n family transposaseCMV25_RS11220Not AvailableNegative14104 - 1478426982.9
dipeptidyl aminopeptidaseCMV25_RS11230Not AvailableNegative15017 - 1619245658.0
winged helix-turn-helix transcriptional regulatorCMV25_RS11235Not AvailablePositive16266 - 1661013213.0
is3 family transposaseCMV25_RS11605Not AvailableNegative16825 - 1770334630.7
helix-turn-helix domain-containing proteinCMV25_RS11245Not AvailableNegative17706 - 1799311187.5
recombinase family proteinCMV25_RS11250Not AvailableNegative18127 - 1843511764.1
class i sam-dependent methyltransferaseCMV25_RS11255Not AvailablePositive18651 - 1940628250.7

Displaying genes 11 – 20 of 79 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.