Dermacoccus nishinomiyaensis str. M25

Gram-positiveCocciAerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Dermacoccaceae

Genus

Dermacoccus

Description

Dermacoccus nishinomiyaensis strain M25 is a Gram-positive, aerobic coccus that exhibits notable resilience in its environmental niche. This microorganism is characterized by its spherical shape, which is typical of many members of the genus Dermacoccus. As an aerobic organism, D. nishinomiyaensis strain M25 necessitates oxygen for its metabolic processes, positioning it within environments where oxygen is readily available. The Gram-positive nature of this strain indicates a thick peptidoglycan layer in its cell wall, which is a common feature among many cocci and contributes to its structural integrity. While the specific habitat and ecological roles of D. nishinomiyaensis strain M25 have not been detailed, its classification suggests a potential adaptability to varied environments, possibly including soil or surfaces where organic matter is present. The unique combination of traits exhibited by D. nishinomiyaensis strain M25 may indicate a role in the degradation of organic materials or in interactions with other microbial communities, though further research would be necessary to elucidate its precise ecological function. This strain could potentially serve as a model for studying aerobic, Gram-positive cocci in microbiological research, contributing to a better understanding of microbial diversity and functionality in various ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyDermacoccaceae
GenusDermacoccus
SpeciesDermacoccus nishinomiyaensis
StrainM25

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatmidgut ant
Biotic relationshipNot Available
Host(s)Lasius niger
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dermacoccus nishinomiyaensis strain M25 plasmid unnamed, complete

Gene Summary

Adenine Count

14682 bp

Thymine Count

14003 bp

Guanine Count

28064 bp

Cytosine Count

27872 bp

Genome Length

84621 bp

Protein-coding Genes

81 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fmn-binding negative transcriptional regulatorHX89_RS16005Not AvailablePositive19 - 48317328.5
wgr domain-containing proteinHX89_RS00010Not AvailablePositive553 - 8259544.11
hypothetical proteinHX89_RS00015Not AvailablePositive773 - 177435032.9
hypothetical proteinHX89_RS16090Not AvailableNegative1891 - 231014950.7
duf4132 domain-containing proteinHX89_RS14930Not AvailablePositive2340 - 352143150.6
hypothetical proteinHX89_RS00030Not AvailableNegative3635 - 418921335.6
deoxyribodipyrimidine photo-lyaseHX89_RS00035Not AvailableNegative4211 - 561152164.7
duf3072 domain-containing proteinHX89_RS00040Not AvailableNegative5817 - 614311300.7
hypothetical proteinHX89_RS00045Not AvailableNegative6354 - 65426203.74
gtpase domain-containing proteinHX89_RS00050Not AvailablePositive6730 - 750627134.3

Displaying genes 1 – 10 of 2847 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.