Flavobacterium hydatis str. DSM 2063

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium hydatis strain DSM 2063 is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 25.0°C. As a member of the Flavobacteriaceae family, this organism exhibits characteristics typical of its genus, including a distinctive yellow pigmentation that is often associated with its metabolic processes. The Gram-negative cell wall structure of F. hydatis contributes to its sensitivity to certain antibiotics and its ability to survive in diverse aquatic environments. This bacterium's optimal growth temperature of 25.0°C suggests a preference for mesophilic conditions, indicating that it may be well-adapted to temperate aquatic habitats. F. hydatis is likely involved in the decomposition of organic matter within these environments, contributing to nutrient cycling and potentially influencing microbial community dynamics. Additionally, the presence of this microorganism in freshwater ecosystems may play a role in the degradation of complex organic compounds, which can enhance the availability of nutrients for other organisms within the ecosystem. The metabolic capabilities of Flavobacterium hydatis strain DSM 2063 can thus provide insights into the ecological functions of microbial communities in aquatic systems, highlighting its potential importance in biogeochemical processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium hydatis
StrainDSM 2063

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium hydatis str. DSM 2063
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium hydatis strain DSM 2063 contig099, whole genome

Gene Summary

Adenine Count

1992839 bp

Thymine Count

1964994 bp

Guanine Count

951046 bp

Cytosine Count

968792 bp

Genome Length

5877671 bp

Protein-coding Genes

4666 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
marr family transcriptional regulatorIW20_03445Not AvailablePositive783996 - 78445717819.7
nitroreductaseIW20_03450Not AvailablePositive784472 - 78510423493.8
lipid-binding proteinIW20_03455Not AvailablePositive785137 - 78570320245.3
hypothetical proteinIW20_03460Not AvailablePositive785964 - 78724146816.5
anthranilate synthaseIW20_03465Not AvailablePositive787542 - 78894253125.7
hypothetical proteinIW20_03470Not AvailablePositive789042 - 78950017582.9
anthranilate synthase subunit iiIW20_03475Not AvailablePositive789590 - 79015621032.9
gcn5 family acetyltransferaseIW20_03480Not AvailablePositive790236 - 79064315634.8
anthranilate phosphoribosyltransferaseIW20_03485Not AvailablePositive790694 - 79168635928.4
indole-3-glycerol phosphate synthaseIW20_03490Not AvailablePositive791760 - 79253928610.7

Displaying genes 661 – 670 of 4747 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.