Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AU13965 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae strain AU13965 chromosome, complete
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine synthase dusb | EJD96_RS02245 | Not Available | Positive | 424819 - 425841 | 37408.9 |
| fis family transcriptional regulator | EJD96_RS02250 | Not Available | Positive | 426025 - 426258 | 8749.6 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | EJD96_RS02255 | Not Available | Positive | 426356 - 427927 | 56124.1 |
| merr family transcriptional regulator | EJD96_RS02260 | Not Available | Negative | 428038 - 429081 | 37711.5 |
| duf2256 domain-containing protein | EJD96_RS02265 | Not Available | Positive | 429176 - 429355 | 6963.39 |
| fad-binding domain-containing protein | EJD96_RS02270 | Not Available | Positive | 429367 - 430686 | 48844.2 |
| thiol-disulfide oxidoreductase dcc family protein | EJD96_RS02275 | Not Available | Positive | 430676 - 431077 | 15408.9 |
| crossover junction endodeoxyribonuclease ruvc | EJD96_RS02280 | Not Available | Positive | 431148 - 431690 | 18375.7 |
| duf808 domain-containing protein | EJD96_RS02285 | Not Available | Negative | 431687 - 432628 | 32406.3 |
| holliday junction branch migration protein ruva | EJD96_RS02290 | Not Available | Positive | 432743 - 433321 | 20121.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


