Herbaspirillum seropedicae str. AU13965

SpirillaMotileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Herbaspirillum

Description

Herbaspirillum seropedicae str. AU13965 is a Gram-negative, spirilla-shaped bacterium that is motile and possesses true flagella, enabling it to navigate its environment effectively. This strain exhibits an aerobic oxygen requirement and is classified as mesophilic, thriving in moderate temperature conditions. It is primarily found in the rhizosphere, where it engages in a free-living biotic relationship with plant roots, contributing to the complex interactions within this habitat. The genome of Herbaspirillum seropedicae str. AU13965 is characterized by two replicons, as evidenced by its genome accessions NZ_CP034395.1 and NZ_CP034394.1. This genomic structure may facilitate the bacterium's adaptability and functional diversity within its ecological niche. The presence of Herbaspirillum seropedicae str. AU13965 in the rhizosphere suggests its potential role in influencing plant health and nutrient uptake, highlighting its significance in soil microbiology and plant-microbe interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusHerbaspirillum
SpeciesHerbaspirillum seropedicae
StrainAU13965

Profile

Physiology
Gram staining propertiesGram-negative
ShapeSpirilla
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Herbaspirillum seropedicae str. AU13965
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
Habitatrhizosphere
Biotic relationshipFree living
Host(s)Homo sapiens, Triticum aestivum, Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Herbaspirillum seropedicae strain AU13965 plasmid unnamed,

Gene Summary

Adenine Count

7952 bp

Thymine Count

8260 bp

Guanine Count

13263 bp

Cytosine Count

13502 bp

Genome Length

42977 bp

Protein-coding Genes

31 genes

Non-Coding Genes

22 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Chromosome partitioning atpaseEJD96_RS15825Not AvailableNegative3504380 - 350527332910.0
Putative bacteriophage gp29 proteinEJD96_RS15830Not AvailablePositive3505909 - 350631313559.2
Duf4123 domain-containing proteinEJD96_RS15835Not AvailablePositive3506313 - 350682819265.3
Hypothetical proteinEJD96_RS15840Not AvailablePositive3506812 - 350716513452.2
Hypothetical proteinEJD96_RS15845Not AvailablePositive3507162 - 350781524616.9
Hypothetical proteinEJD96_RS15850Not AvailablePositive3507823 - 350855127289.7
Hypothetical proteinEJD96_RS15855Not AvailablePositive3508788 - 350950726361.2
Hypothetical proteinEJD96_RS15860Not AvailablePositive3509603 - 351032826647.7
Hypothetical proteinEJD96_RS15865Not AvailablePositive3510981 - 35111908006.75
Hypothetical proteinEJD96_RS15870Not AvailablePositive3511194 - 35114068013.92

Displaying genes 1 – 10 of 4818 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.