Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AU13965 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae strain AU13965 chromosome, complete
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvra | EJD96_RS19860 | Not Available | Positive | 4417831 - 4420689 | 105152.0 |
| phytanoyl-coa dioxygenase family protein | EJD96_RS19865 | Not Available | Positive | 4420860 - 4421627 | 28167.5 |
| methyl-accepting chemotaxis protein | EJD96_RS19870 | Not Available | Negative | 4421555 - 4423225 | 59695.2 |
| cation:proton antiporter | EJD96_RS19875 | Not Available | Negative | 4423333 - 4425324 | 71091.4 |
| kpsf/gutq family sugar-phosphate isomerase | EJD96_RS19880 | Not Available | Positive | 4425682 - 4426710 | 36244.8 |
| kdsc family phosphatase | EJD96_RS19885 | Not Available | Positive | 4426710 - 4427264 | 19708.7 |
| lps export abc transporter periplasmic protein lptc | EJD96_RS19890 | Not Available | Positive | 4427261 - 4427869 | 22510.2 |
| lipopolysaccharide transport periplasmic protein lpta | EJD96_RS19895 | Not Available | Positive | 4427939 - 4428544 | 22051.2 |
| lps export abc transporter atp-binding protein | EJD96_RS19900 | Not Available | Positive | 4428546 - 4429289 | 27308.1 |
| rna polymerase factor sigma-54 | EJD96_RS19905 | Not Available | Positive | 4429362 - 4430852 | 55044.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


