Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AU13965 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Herbaspirillum seropedicae strain AU13965 chromosome, complete
Gene Summary
Adenine Count
988071 bp
Thymine Count
984583 bp
Guanine Count
1688182 bp
Cytosine Count
1689162 bp
Genome Length
5349998 bp
Protein-coding Genes
4674 genes
Non-Coding Genes
91 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit alpha | EJD96_RS09635 | Not Available | Positive | 2093413 - 2094441 | 38093.4 |
| phenylalanine--trna ligase subunit beta | EJD96_RS09640 | Not Available | Positive | 2094521 - 2096947 | 88461.2 |
| integration host factor subunit alpha | EJD96_RS09645 | Not Available | Positive | 2097012 - 2097425 | 15370.2 |
| merr family transcriptional regulator | EJD96_RS09650 | Not Available | Positive | 2097429 - 2097836 | 15594.9 |
| gnat family n-acetyltransferase | EJD96_RS09655 | Not Available | Positive | 2098042 - 2098545 | 18151.1 |
| phosphatase pap2 family protein | EJD96_RS09660 | Not Available | Negative | 2098616 - 2099242 | 22508.0 |
| xrtb/pep-cterm-associated polysaccharide biosynthesis outer membrane protein epsl | EJD96_RS09665 | Not Available | Positive | 2099676 - 2100842 | 43649.9 |
| undecaprenyl-phosphate glucose phosphotransferase | EJD96_RS09670 | Not Available | Positive | 2100853 - 2102265 | 53388.4 |
| epsd family peptidyl-prolyl cis-trans isomerase | EJD96_RS09675 | Not Available | Positive | 2102322 - 2103236 | 32867.6 |
| polysaccharide export protein epse | EJD96_RS09680 | Not Available | Positive | 2103316 - 2104110 | 28519.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


