Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Capsid protein | DFO49_3096 | Not Available | Positive | 3400703 - 3401746 | 38042.0 |
| Putative small terminase subunit | DFO49_3097 | Not Available | Positive | 3401746 - 3402465 | 26220.5 |
| Putative head completion protein | DFO49_3098 | Not Available | Positive | 3402555 - 3403046 | 18299.7 |
| Tail protein | DFO49_3099 | Not Available | Positive | 3403046 - 3403255 | 7148.46 |
| Hypothetical protein | DFO49_3100 | Not Available | Positive | 3403296 - 3403670 | 13280.6 |
| Lysozyme | DFO49_3101 | Not Available | Positive | 3403667 - 3404197 | 19713.6 |
| Rz | DFO49_3102 | Not Available | Positive | 3404194 - 3404763 | 19840.1 |
| Tail protein | DFO49_3103 | Not Available | Positive | 3404717 - 3405202 | 18289.9 |
| Gp39, phage virion morphogenesis protein | DFO49_3104 | Not Available | Positive | 3405199 - 3405669 | 17730.5 |
| uncharacterized protein (duf2267 family) | DFO49_3105 | Not Available | Positive | 3405818 - 3406249 | 16261.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


