Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | AG215 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | rhizosphere |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Triticum aestivum, Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1082353 bp
Thymine Count
1079353 bp
Guanine Count
1807808 bp
Cytosine Count
1813288 bp
Genome Length
5783094 bp
Protein-coding Genes
5031 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 3387551 - 3387580 | Not Available |
| Integrase | DFO49_3087 | Not Available | Positive | 3390406 - 3390744 | 12433.0 |
| hypothetical protein | DFO49_3088 | Not Available | Negative | 3391659 - 3391862 | 7731.25 |
| methyl-accepting chemotaxis protein | DFO49_3089 | Not Available | Negative | 3391926 - 3393470 | 54131.7 |
| methyl-accepting chemotaxis sensory transducer | DFO49_3090 | Not Available | Positive | 3394222 - 3395859 | 58492.7 |
| hypothetical protein | DFO49_3091 | Not Available | Positive | 3395937 - 3396239 | 11209.4 |
| Hypothetical protein | DFO49_3092 | Not Available | Negative | 3396590 - 3396829 | 8690.24 |
| Gp5, phage portal protein, pbsx family | DFO49_3093 | Not Available | Negative | 3396832 - 3397884 | 38928.2 |
| Gp4, phage terminase, atpase subunit | DFO49_3094 | Not Available | Negative | 3397884 - 3399665 | 67699.0 |
| Gpo family capsid scaffolding protein | DFO49_3095 | Not Available | Positive | 3399809 - 3400651 | 30149.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


