Vibrio campbellii str. DS40M4

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio campbellii str. DS40M4 is a Gram-negative bacterium that thrives optimally at a temperature of 35.0°C. This strain is predominantly found in marine environments, specifically within the Changjiang estuary and various coastal sites. The genomic architecture of V. campbellii str. DS40M4 is characterized by the presence of two replicons, indicating a complex genetic organization that may contribute to its adaptability in marine ecosystems. The genomic information for this strain is available under the accessions NZ_CP030790.1 and NZ_CP030789.1, which may provide further insights into its genetic and functional capabilities. The ecological niche of V. campbellii str. DS40M4 suggests its potential role in nutrient cycling and interactions within marine microbial communities, highlighting its importance in coastal ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio campbellii
StrainDS40M4

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio campbellii str. DS40M4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature35
Temperature rangeNot Available
HabitatChangjiang estuary; coastal sites; Marine
Biotic relationshipNot Available
Host(s)Mollusca, Artemia sp.
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio campbellii strain DS40M4 chromosome 2, complete sequence.

Gene Summary

Adenine Count

519530 bp

Thymine Count

522587 bp

Guanine Count

420652 bp

Cytosine Count

415254 bp

Genome Length

1878023 bp

Protein-coding Genes

1719 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDSB67_RS26140Not AvailablePositive274185 - 2743134639.62
hypothetical proteinDSB67_RS26145Not AvailablePositive274313 - 2744414398.62
marr family winged helix-turn-helix transcriptional regulatorDSB67_RS17085Not AvailableNegative274519 - 27493515825.2
cdf family co(ii)/ni(ii) efflux transporter dmefDSB67_RS17090Not AvailableNegative274935 - 27584333689.8
cobw family gtp-binding proteinDSB67_RS17095Not AvailableNegative276052 - 27705036709.8
carbonate dehydrataseDSB67_RS17100Not AvailableNegative277040 - 27760020156.0
dihydroorotaseDSB67_RS17105Not AvailableNegative277749 - 27908348974.3
fur family transcriptional regulatorDSB67_RS17110Not AvailableNegative279187 - 27964517114.8
patatin family proteinDSB67_RS17115Not AvailablePositive279825 - 28067331579.2
pirin family proteinDSB67_RS17120Not AvailableNegative280915 - 28176331394.2

Displaying genes 291 – 300 of 1860 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.